IL_9XFK_072

3D structure

PDB id

9XFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XFK|1|I|U|1851
9XFK|1|I|U|1852
9XFK|1|I|A|1853
9XFK|1|I|A|1854
9XFK|1|I|U|1855
9XFK|1|I|U|1856
9XFK|1|I|G|1857
9XFK|1|I|A|1858
9XFK|1|I|U|1859
9XFK|1|I|G|1860
*
9XFK|1|I|U|1882
9XFK|1|I|U|1883
9XFK|1|I|G|1884
9XFK|1|I|A|1885
9XFK|1|I|U|1886
9XFK|1|I|C|1887
9XFK|1|I|G|1888
9XFK|1|I|A|1889
9XFK|1|I|A|1890
9XFK|1|I|G|1891

Current chains

Chain I

23S rRNA

Nearby chains