IL_9XFL_040

3D structure

PDB id

9XFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

CCCAGACAGCCA*UGGUCGAG

Length

20 nucleotides

Bulged bases

9XFL|1|I|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XFL|1|I|C|1043
9XFL|1|I|C|1044
9XFL|1|I|C|1045
9XFL|1|I|A|1046
9XFL|1|I|G|1047
9XFL|1|I|A|1048
9XFL|1|I|C|1049
9XFL|1|I|A|1050
9XFL|1|I|G|1051
9XFL|1|I|C|1052
9XFL|1|I|C|1053
9XFL|1|I|A|1054
*
9XFL|1|I|U|1105
9XFL|1|I|G|1106
9XFL|1|I|G|1107
9XFL|1|I|U|1108
9XFL|1|I|C|1109
9XFL|1|I|G|1110
9XFL|1|I|A|1111
9XFL|1|I|G|1112

Current chains

Chain I

23S rRNA

Nearby chains

Chain O

Large ribosomal subunit protein uL6

Chain m

50S ribosomal protein L36