IL_9XFL_085

3D structure

PDB id

9XFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

GCCUUGAUG*CUUUAAUGU

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XFL|1|I|G|2102
9XFL|1|I|C|2103
9XFL|1|I|C|2104
9XFL|1|I|U|2105
9XFL|1|I|U|2106
9XFL|1|I|G|2107
9XFL|1|I|A|2108
9XFL|1|I|U|2109
9XFL|1|I|G|2110
*
9XFL|1|I|C|2179
9XFL|1|I|U|2180
9XFL|1|I|U|2181
9XFL|1|I|U|2182
9XFL|1|I|A|2183
9XFL|1|I|A|2184
9XFL|1|I|U|2185
9XFL|1|I|G|2186
9XFL|1|I|U|2187

Current chains

Chain I

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L9