IL_9XTE_019

3D structure

PDB id

9XTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class A, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

9XTE|1|A|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9XTE_019 not in the Motif Atlas

Homologous match to IL_6CZR_358

Geometric discrepancy: 0.1888

The information below is about IL_6CZR_358

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

9XTE|1|A|U|375
9XTE|1|A|G|376
*
9XTE|1|A|U|387
9XTE|1|A|G|388
9XTE|1|A|A|389

Current chains

Chain A

RNA (1026-MER)

Nearby chains

Chain P

Small ribosomal subunit protein bS16