IL_9XTE_032

3D structure

PDB id

9XTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class A, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

UC*GAA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9XTE_032 not in the Motif Atlas

Geometric match to IL_8B0X_031

Geometric discrepancy: 0.1314

The information below is about IL_8B0X_031

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15011.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

9XTE|1|A|U|659
9XTE|1|A|C|660
*
9XTE|1|A|G|745
9XTE|1|A|A|746
9XTE|1|A|A|747

Current chains

Chain A

RNA (1026-MER)

Nearby chains

Chain F

30S ribosomal protein S6, fully modified isoform

Chain O

30S ribosomal protein S15