IL_9XWO_165
3D structure
- PDB id
- 9XWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of SecM-arrested 70S ribosome (short SecM)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 9XWO|1|a|A|2602
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9XWO_165 not in the Motif Atlas
- Geometric match to IL_8B0X_159
- Geometric discrepancy: 0.1482
- The information below is about IL_8B0X_159
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 175
Unit IDs
9XWO|1|a|C|2591
9XWO|1|a|G|2592
*
9XWO|1|a|C|2601
9XWO|1|a|A|2602
9XWO|1|a|G|2603
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 6
- Secretion monitor
- Chain Y
- Transfer RNA; tRNA
- Chain Z
- Transfer RNA; tRNA
- Chain c
- Large ribosomal subunit protein uL2
- Chain v
- Large ribosomal subunit protein bL27
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