3D structure

PDB id
9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CUCAGUAA*UGAACAG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Y49|1|A5|C|81
9Y49|1|A5|U|82
9Y49|1|A5|C|83
9Y49|1|A5|A|84
9Y49|1|A5|G|85
9Y49|1|A5|U|86
9Y49|1|A5|A|87
9Y49|1|A5|A|88
*
9Y49|1|A5|U|96
9Y49|1|A5|G|97
9Y49|1|A5|A|98
9Y49|1|A5|A|99
9Y49|1|A5|C|100
9Y49|1|A5|A|101
9Y49|1|A5|G|102

Current chains

Chain A5
LSU-alpha rRNA (1722-MER)

Nearby chains

Chain CL
60S ribosomal protein L13
Chain CN
60S ribosomal protein L15
Chain CQ
60S ribosomal protein L18
Chain Ca
60S ribosomal protein L27a

Coloring options:

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