IL_9Y49_032

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUUC*GG

Length

6 nucleotides

Bulged bases

9Y49|1|A5|U|513, 9Y49|1|A5|U|514

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Y49_032 not in the Motif Atlas

Geometric match to IL_9PN5_083

Geometric discrepancy: 0.208

The information below is about IL_9PN5_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71421.5

Basepair signature

cWW-cWW

Number of instances in this motif group

36

Unit IDs

9Y49|1|A5|U|512
9Y49|1|A5|U|513
9Y49|1|A5|U|514
9Y49|1|A5|C|515
*
9Y49|1|A5|G|646
9Y49|1|A5|G|647

Current chains

Chain A5

LSU-alpha rRNA (1722-MER)

Nearby chains

Chain CL

60S ribosomal protein L13