IL_9Y49_040

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A5|G|745
9Y49|1|A5|A|746
9Y49|1|A5|A|747
9Y49|1|A5|G|748
9Y49|1|A5|G|749
9Y49|1|A5|U|750
9Y49|1|A5|G|751
9Y49|1|A5|G|752
*
9Y49|1|A5|U|911
9Y49|1|A5|G|912
9Y49|1|A5|U|913
9Y49|1|A5|U|914
9Y49|1|A5|A|915
9Y49|1|A5|C|916
9Y49|1|A5|A|917
9Y49|1|A5|G|918
9Y49|1|A5|C|919

Current chains

Chain A5

LSU-alpha rRNA (1722-MER)

Nearby chains

Chain CM

60S ribosomal protein L14

Chain CS

60S ribosomal protein L18a