IL_9Y49_083

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUCAUCAG*CUGGAG

Length

14 nucleotides

Bulged bases

9Y49|1|A5|U|1930, 9Y49|1|A5|C|1931, 9Y49|1|A5|G|2055, 9Y49|1|A5|A|2057

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A5|C|1926
9Y49|1|A5|U|1927
9Y49|1|A5|C|1928
9Y49|1|A5|A|1929
9Y49|1|A5|U|1930
9Y49|1|A5|C|1931
9Y49|1|A5|A|1932
9Y49|1|A5|G|1933
*
9Y49|1|A5|C|2053
9Y49|1|A5|U|2054
9Y49|1|A5|G|2055
9Y49|1|A5|G|2056
9Y49|1|A5|A|2057
9Y49|1|A5|G|2058

Current chains

Chain A5

LSU-alpha rRNA (1722-MER)

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain CH

60S ribosomal protein L9

Chain CO

60S ribosomal protein L13a

Chain CS

60S ribosomal protein L18a

Chain Cm

60S ribosomal protein L40