3D structure

PDB id
9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CCUUGAAG*UGGAG
Length
13 nucleotides
Bulged bases
9Y49|1|A6|U|2305
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Y49|1|A6|C|2302
9Y49|1|A6|C|2303
9Y49|1|A6|U|2304
9Y49|1|A6|U|2305
9Y49|1|A6|G|2306
9Y49|1|A6|A|2307
9Y49|1|A6|A|2308
9Y49|1|A6|G|2309
*
9Y49|1|A6|U|2329
9Y49|1|A6|G|2330
9Y49|1|A6|G|2331
9Y49|1|A6|A|2332
9Y49|1|A6|G|2333

Current chains

Chain A6
LSU-beta rRNA (2069-MER)

Nearby chains

Chain A5
Large subunit ribosomal RNA; LSU rRNA
Chain A8
5.8S ribosomal RNA; 5.8S rRNA
Chain CC
60S ribosomal protein L4
Chain CP
60S ribosomal protein L17
Chain CY
60S ribosomal protein L26
Chain Ce
60S ribosomal protein L32

Coloring options:

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