IL_9Y49_124

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUCAAAGU*AAUGAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|G|3714
9Y49|1|A6|U|3715
9Y49|1|A6|C|3716
9Y49|1|A6|A|3717
9Y49|1|A6|A|3718
9Y49|1|A6|A|3719
9Y49|1|A6|G|3720
9Y49|1|A6|U|3721
*
9Y49|1|A6|A|3732
9Y49|1|A6|A|3733
9Y49|1|A6|U|3734
9Y49|1|A6|G|3735
9Y49|1|A6|A|3736
9Y49|1|A6|A|3737
9Y49|1|A6|G|3738
9Y49|1|A6|C|3739

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CA

60S ribosomal protein L8

Chain Ci

60S ribosomal protein L36

Chain Cz

60S ribosomal protein L10a

Chain tR

Transfer RNA; tRNA