IL_9Y49_132
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAUGA*UGAUCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y49_132 not in the Motif Atlas
- Homologous match to IL_9H3G_106
- Geometric discrepancy: 0.538
- The information below is about IL_9H3G_106
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31545.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
9Y49|1|A6|C|3948
9Y49|1|A6|A|3949
9Y49|1|A6|U|3950
9Y49|1|A6|G|3951
9Y49|1|A6|A|3952
*
9Y49|1|A6|U|4060
9Y49|1|A6|G|4061
9Y49|1|A6|A|4062
9Y49|1|A6|U|4063
9Y49|1|A6|C|4064
9Y49|1|A6|G|4065
Current chains
- Chain A6
- LSU-beta rRNA (2069-MER)
Nearby chains
- Chain AB
- 40S ribosomal protein S3a
- Chain Ci
- 60S ribosomal protein L36
- Chain Cz
- 60S ribosomal protein L10a
Coloring options: