IL_9Y49_133

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

9Y49|1|A6|U|3957, 9Y49|1|A6|G|3961, 9Y49|1|A6|A|3962, 9Y49|1|A6|A|3963, 9Y49|1|A6|U|3964, 9Y49|1|A6|A|3965

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|G|3955
9Y49|1|A6|G|3956
9Y49|1|A6|U|3957
9Y49|1|A6|G|3958
9Y49|1|A6|U|3959
9Y49|1|A6|A|3960
9Y49|1|A6|G|3961
9Y49|1|A6|A|3962
9Y49|1|A6|A|3963
9Y49|1|A6|U|3964
9Y49|1|A6|A|3965
9Y49|1|A6|A|3966
*
9Y49|1|A6|U|4055
9Y49|1|A6|A|4056
9Y49|1|A6|C|4057

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain Cz

60S ribosomal protein L10a

Chain tR

Transfer RNA; tRNA