IL_9Y49_134

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUGGGAGG*CCGCCGGUGAAAUACCAC

Length

26 nucleotides

Bulged bases

9Y49|1|A6|C|4041, 9Y49|1|A6|U|4049

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|G|3967
9Y49|1|A6|U|3968
9Y49|1|A6|G|3969
9Y49|1|A6|G|3970
9Y49|1|A6|G|3971
9Y49|1|A6|A|3972
9Y49|1|A6|G|3973
9Y49|1|A6|G|3974
*
9Y49|1|A6|C|4037
9Y49|1|A6|C|4038
9Y49|1|A6|G|4039
9Y49|1|A6|C|4040
9Y49|1|A6|C|4041
9Y49|1|A6|G|4042
9Y49|1|A6|G|4043
9Y49|1|A6|U|4044
9Y49|1|A6|G|4045
9Y49|1|A6|A|4046
9Y49|1|A6|A|4047
9Y49|1|A6|A|4048
9Y49|1|A6|U|4049
9Y49|1|A6|A|4050
9Y49|1|A6|C|4051
9Y49|1|A6|C|4052
9Y49|1|A6|A|4053
9Y49|1|A6|C|4054

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain Cz

60S ribosomal protein L10a

Chain tR

Transfer RNA; tRNA