IL_9Y49_181
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUAGUAC*GGAAUA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y49_181 not in the Motif Atlas
- Homologous match to IL_4V9F_106
- Geometric discrepancy: 0.2073
- The information below is about IL_4V9F_106
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_02666.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9Y49|1|A7|U|72
9Y49|1|A7|U|73
9Y49|1|A7|A|74
9Y49|1|A7|G|75
9Y49|1|A7|U|76
9Y49|1|A7|A|77
9Y49|1|A7|C|78
*
9Y49|1|A7|G|98
9Y49|1|A7|G|99
9Y49|1|A7|A|100
9Y49|1|A7|A|101
9Y49|1|A7|U|102
9Y49|1|A7|A|103
Current chains
- Chain A7
- 5S rRNA (121-MER)
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
- Chain CD
- 60S ribosomal protein L5
- Chain CF
- 60S ribosomal protein L7
- Chain CI
- 60S ribosomal protein L10-like
- Chain CS
- 60S ribosomal protein L18a
- Chain CT
- 60S ribosomal protein L21
Coloring options: