IL_9Y49_192

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUAUGGUU*GAACGUC

Length

16 nucleotides

Bulged bases

9Y49|1|B2|G|113, 9Y49|1|B2|G|114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|G|108
9Y49|1|B2|U|109
9Y49|1|B2|U|110
9Y49|1|B2|A|111
9Y49|1|B2|U|112
9Y49|1|B2|G|113
9Y49|1|B2|G|114
9Y49|1|B2|U|115
9Y49|1|B2|U|116
*
9Y49|1|B2|G|347
9Y49|1|B2|A|348
9Y49|1|B2|A|349
9Y49|1|B2|C|350
9Y49|1|B2|G|351
9Y49|1|B2|U|352
9Y49|1|B2|C|353

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AE

40S ribosomal protein S4, X isoform

Chain AI

40S ribosomal protein S8

Chain AL

40S ribosomal protein S11