3D structure

PDB id
9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
AGGGCAAGUC*GCU
Length
13 nucleotides
Bulged bases
9Y49|1|B2|U|607
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Y49|1|B2|A|599
9Y49|1|B2|G|600
9Y49|1|B2|G|601
9Y49|1|B2|G|602
9Y49|1|B2|C|603
9Y49|1|B2|A|604
9Y49|1|B2|A|605
9Y49|1|B2|G|606
9Y49|1|B2|U|607
9Y49|1|B2|C|608
*
9Y49|1|B2|G|635
9Y49|1|B2|C|636
9Y49|1|B2|U|637

Current chains

Chain B2
18S rRNA (1786-MER)

Nearby chains

Chain AC
40S ribosomal protein S2
Chain AD
40S ribosomal protein S3
Chain AJ
40S ribosomal protein S9
Chain Ae
40S ribosomal protein S30

Coloring options:

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