IL_9Y49_223

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|G|807
9Y49|1|B2|A|808
9Y49|1|B2|A|809
9Y49|1|B2|A|810
9Y49|1|B2|A|811
9Y49|1|B2|A|812
9Y49|1|B2|A|813
9Y49|1|B2|U|814
9Y49|1|B2|U|815
*
9Y49|1|B2|A|849
9Y49|1|B2|C|850
9Y49|1|B2|C|851
9Y49|1|B2|G|852
9Y49|1|B2|C|853
9Y49|1|B2|A|854
9Y49|1|B2|G|855
9Y49|1|B2|C|856

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AE

40S ribosomal protein S4, X isoform

Chain AJ

40S ribosomal protein S9

Chain AL

40S ribosomal protein S11

Chain AW

40S ribosomal protein S15a