IL_9Y49_241

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

ACCA*UCCCU

Length

9 nucleotides

Bulged bases

9Y49|1|B2|C|1215, 9Y49|1|B2|C|1216

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|A|1214
9Y49|1|B2|C|1215
9Y49|1|B2|C|1216
9Y49|1|B2|A|1217
*
9Y49|1|B2|U|1681
9Y49|1|B2|C|1682
9Y49|1|B2|C|1683
9Y49|1|B2|C|1684
9Y49|1|B2|U|1685

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AF

40S ribosomal protein S5

Chain AQ

40S ribosomal protein S16

Chain Aa

40S ribosomal protein S26

Chain Ac

40S ribosomal protein S28

Chain tR

Transfer RNA; tRNA