IL_9Y49_252
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGG*CGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y49_252 not in the Motif Atlas
- Homologous match to IL_9H3G_223
- Geometric discrepancy: 0.2842
- The information below is about IL_9H3G_223
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10892.4
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 62
Unit IDs
9Y49|1|B2|U|1347
9Y49|1|B2|G|1348
9Y49|1|B2|G|1349
*
9Y49|1|B2|C|1380
9Y49|1|B2|G|1381
9Y49|1|B2|A|1382
Current chains
- Chain B2
- 18S rRNA (1786-MER)
Nearby chains
- Chain AA
- 40S ribosomal protein SA
- Chain AC
- 40S ribosomal protein S2
- Chain AD
- 40S ribosomal protein S3
- Chain AR
- 40S ribosomal protein S17
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