IL_9Y49_260

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAAG*CCCGAG

Length

10 nucleotides

Bulged bases

9Y49|1|B2|A|1454, 9Y49|1|B2|A|1474

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|C|1453
9Y49|1|B2|A|1454
9Y49|1|B2|A|1455
9Y49|1|B2|G|1456
*
9Y49|1|B2|C|1470
9Y49|1|B2|C|1471
9Y49|1|B2|C|1472
9Y49|1|B2|G|1473
9Y49|1|B2|A|1474
9Y49|1|B2|G|1475

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AF

40S ribosomal protein S5

Chain AQ

40S ribosomal protein S16

Chain AR

40S ribosomal protein S17

Chain Ac

40S ribosomal protein S28

Chain Ag

Guanine nucleotide-binding protein subunit beta-2-like 1