IL_9Y49_276
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y49_276 not in the Motif Atlas
- Geometric match to IL_2A64_006
- Geometric discrepancy: 0.2276
- The information below is about IL_2A64_006
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.4
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 26
Unit IDs
9Y49|1|B2|C|1742
9Y49|1|B2|G|1743
9Y49|1|B2|G|1744
9Y49|1|B2|A|1745
9Y49|1|B2|U|1746
*
9Y49|1|B2|A|1788
9Y49|1|B2|G|1789
9Y49|1|B2|A|1790
9Y49|1|B2|A|1791
9Y49|1|B2|G|1792
Current chains
- Chain B2
- 18S rRNA (1786-MER)
Nearby chains
- Chain AG
- 40S ribosomal protein S6
- Chain AI
- 40S ribosomal protein S8
- Chain CW
- 60S ribosomal protein L24
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