IL_9YDC_045
3D structure
- PDB id
- 9YDC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with A/P, P/E tRNAs from uL16 P-site loop mutants in bypass condition
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- UGCCGGAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YDC|1|A|U|1173
9YDC|1|A|G|1174
9YDC|1|A|C|1175
9YDC|1|A|C|1176
9YDC|1|A|G|1177
9YDC|1|A|G|1178
9YDC|1|A|A|1179
9YDC|1|A|A|1180
*
9YDC|1|A|U|1325
9YDC|1|A|A|1326
Current chains
- Chain A
- 25S RNA
Nearby chains
- Chain LI
- 60S ribosomal protein L7-A
- Chain LQ
- 60S ribosomal protein L16-A
- Chain LU
- 60S ribosomal protein L20-A
- Chain Lh
- 60S ribosomal protein L33-A
Coloring options: