IL_9YDC_177
3D structure
- PDB id
- 9YDC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with A/P, P/E tRNAs from uL16 P-site loop mutants in bypass condition
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- ACGUUUGG*CCAUCGU
- Length
- 15 nucleotides
- Bulged bases
- 9YDC|1|E|U|820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YDC|1|E|A|817
9YDC|1|E|C|818
9YDC|1|E|G|819
9YDC|1|E|U|820
9YDC|1|E|U|821
9YDC|1|E|U|822
9YDC|1|E|G|823
9YDC|1|E|G|824
*
9YDC|1|E|C|848
9YDC|1|E|C|849
9YDC|1|E|A|850
9YDC|1|E|U|851
9YDC|1|E|C|852
9YDC|1|E|G|853
9YDC|1|E|U|854
Current chains
- Chain E
- 18S rRNA
Nearby chains
- Chain LT
- 60S ribosomal protein L19-A
- Chain SU
- 40S ribosomal protein S7-A
- Chain SX
- 40S ribosomal protein S11-A
Coloring options: