IL_9YDC_207

3D structure

PDB id

9YDC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with A/P, P/E tRNAs from uL16 P-site loop mutants in bypass condition

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CUAC*GAG

Length

7 nucleotides

Bulged bases

9YDC|1|E|U|1340

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YDC|1|E|C|1339
9YDC|1|E|U|1340
9YDC|1|E|A|1341
9YDC|1|E|C|1342
*
9YDC|1|E|G|1383
9YDC|1|E|A|1384
9YDC|1|E|G|1385

Current chains

Chain E

18S rRNA

Nearby chains

Chain SF

40S ribosomal protein S16-A

Chain SG

40S ribosomal protein S17-B

Chain SJ

40S ribosomal protein S20

Chain SO

Guanine nucleotide-binding protein subunit beta-like protein