IL_9YDD_196
3D structure
- PDB id
- 9YDD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with A/A, P/P tRNAs from uL16 P-site loop mutants in bypass condition
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- AUAAGGAUUG*CUUGAUUU
- Length
- 18 nucleotides
- Bulged bases
- 9YDD|1|E|G|1228
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YDD|1|E|A|1224
9YDD|1|E|U|1225
9YDD|1|E|A|1226
9YDD|1|E|A|1227
9YDD|1|E|G|1228
9YDD|1|E|G|1229
9YDD|1|E|A|1230
9YDD|1|E|U|1231
9YDD|1|E|U|1232
9YDD|1|E|G|1233
*
9YDD|1|E|C|1252
9YDD|1|E|U|1253
9YDD|1|E|U|1254
9YDD|1|E|G|1255
9YDD|1|E|A|1256
9YDD|1|E|U|1257
9YDD|1|E|U|1258
9YDD|1|E|U|1259
Current chains
- Chain E
- 18S rRNA
Nearby chains
- Chain SC
- 40S ribosomal protein S10-A
- Chain SD
- 40S ribosomal protein S12
- Chain SM
- 40S ribosomal protein S29-A
- Chain SN
- Ubiquitin-40S ribosomal protein S31
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