IL_9YDE_209
3D structure
- PDB id
- 9YDE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with P/P tRNA from uL16 P-site loop mutants in bypass condition
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- AAUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- 9YDE|1|E|A|1346, 9YDE|1|E|U|1347
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YDE|1|E|A|1345
9YDE|1|E|A|1346
9YDE|1|E|U|1347
9YDE|1|E|A|1348
*
9YDE|1|E|U|1377
9YDE|1|E|U|1378
9YDE|1|E|C|1379
9YDE|1|E|U|1380
Current chains
- Chain E
- 18S rRNA
Nearby chains
- Chain SF
- 40S ribosomal protein S16-A
- Chain SJ
- 40S ribosomal protein S20
- Chain SO
- Guanine nucleotide-binding protein subunit beta-like protein
Coloring options: