IL_9YPG_242

3D structure

PDB id

9YPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

GTPBP1*GCP*Phe-tRNA*ribosome in the GTPase activation-like state, Structure III

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPG|1|9|A|1287
9YPG|1|9|U|1288
9YPG|1|9|U|1289
9YPG|1|9|G|1290
*
9YPG|1|9|C|1309
9YPG|1|9|U|1310
9YPG|1|9|C|1311
9YPG|1|9|G|1312
9YPG|1|9|A|1313
9YPG|1|9|U|1314

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain KK

Small ribosomal subunit protein eS10

Chain MM

40S ribosomal protein S12

Chain dd

eS29

Chain ff

Ribosomal protein S27a