IL_9YPO_258

3D structure

PDB id

9YPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIa

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPO|1|9|G|1604
9YPO|1|9|G|1605
9YPO|1|9|G|1606
9YPO|1|9|A|1607
9YPO|1|9|U|1608
9YPO|1|9|C|1609
9YPO|1|9|G|1610
*
9YPO|1|9|C|1629
9YPO|1|9|A|1630
9YPO|1|9|U|1631
9YPO|1|9|G|1632
9YPO|1|9|A|1633
9YPO|1|9|A|1634
9YPO|1|9|C|1635

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain FF

Ribosomal protein S5

Chain SS

uS13

Chain TT

eS19