IL_9YPV_252
3D structure
- PDB id
- 9YPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 9YPV|1|9|U|1585, 9YPV|1|9|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YPV|1|9|G|1541
9YPV|1|9|C|1542
9YPV|1|9|U|1543
9YPV|1|9|C|1544
9YPV|1|9|A|1545
9YPV|1|9|G|1546
9YPV|1|9|C|1547
9YPV|1|9|G|1548
9YPV|1|9|U|1549
9YPV|1|9|G|1550
*
9YPV|1|9|C|1582
9YPV|1|9|C|1583
9YPV|1|9|G|1584
9YPV|1|9|U|1585
9YPV|1|9|U|1586
9YPV|1|9|G|1587
9YPV|1|9|A|1588
9YPV|1|9|A|1589
9YPV|1|9|C|1590
9YPV|1|9|C|1591
9YPV|1|9|C|1592
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain DD
- Ribosomal protein S3
- Chain FF
- Ribosomal protein S5
- Chain QQ
- uS9
- Chain TT
- eS19
- Chain UU
- uS10
- Chain ZZ
- eS25
- Chain dd
- eS29
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