IL_9YPW_031

3D structure

PDB id

9YPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

GTPBP1*GDP*Phe-tRNA*ribosome in the post-GTP hydrolysis state, Structure IV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUCCC*GUCGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPW|1|5|C|519
9YPW|1|5|U|520
9YPW|1|5|C|521
9YPW|1|5|C|522
9YPW|1|5|C|523
*
9YPW|1|5|G|638
9YPW|1|5|U|639
9YPW|1|5|C|640
9YPW|1|5|G|641
9YPW|1|5|G|642

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain L

60S ribosomal protein L13