IL_9YPW_189

3D structure

PDB id

9YPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

GTPBP1*GDP*Phe-tRNA*ribosome in the post-GTP hydrolysis state, Structure IV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

9YPW|1|9|U|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPW|1|9|G|145
9YPW|1|9|G|146
9YPW|1|9|A|147
9YPW|1|9|U|148
9YPW|1|9|A|149
9YPW|1|9|A|150
9YPW|1|9|C|151
*
9YPW|1|9|G|167
9YPW|1|9|C|168
9YPW|1|9|U|169
9YPW|1|9|A|170
9YPW|1|9|A|171
9YPW|1|9|U|172
9YPW|1|9|A|173
9YPW|1|9|C|174

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

40S ribosomal protein S6

Chain W

eL24

Chain YY

Small ribosomal subunit protein eS24