3D structure

PDB id
9YPY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosome with accommodated A-site tRNA, Structure V
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GCG*UC
Length
5 nucleotides
Bulged bases
9YPY|1|5|C|449
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9YPY|1|5|G|448
9YPY|1|5|C|449
9YPY|1|5|G|450
*
9YPY|1|5|U|1297
9YPY|1|5|C|1298

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain e
Ribosomal protein L32
Chain f
eL33

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.1285 s