IL_9YPY_110
3D structure
- PDB id
- 9YPY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome with accommodated A-site tRNA, Structure V
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAAGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 9YPY|1|5|A|3663, 9YPY|1|5|U|3679, 9YPY|1|5|C|3683
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YPY|1|5|C|3660
9YPY|1|5|G|3661
9YPY|1|5|A|3662
9YPY|1|5|A|3663
9YPY|1|5|G|3664
9YPY|1|5|G|3665
*
9YPY|1|5|U|3677
9YPY|1|5|G|3678
9YPY|1|5|U|3679
9YPY|1|5|U|3680
9YPY|1|5|G|3681
9YPY|1|5|A|3682
9YPY|1|5|C|3683
9YPY|1|5|G|3684
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain A
- Ribosomal protein L8
- Chain p
- eL43
Coloring options: