IL_9YPY_125

3D structure

PDB id

9YPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome with accommodated A-site tRNA, Structure V

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPY|1|5|G|3955
9YPY|1|5|G|3956
9YPY|1|5|U|3957
9YPY|1|5|G|3958
9YPY|1|5|U|3959
9YPY|1|5|A|3960
9YPY|1|5|G|3961
9YPY|1|5|A|3962
9YPY|1|5|A|3963
9YPY|1|5|U|3964
9YPY|1|5|A|3965
9YPY|1|5|A|3966
*
9YPY|1|5|U|4055
9YPY|1|5|A|4056
9YPY|1|5|C|4057

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 11

Transfer RNA; tRNA