IL_9YPY_139

3D structure

PDB id

9YPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome with accommodated A-site tRNA, Structure V

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCAAG*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPY|1|5|C|4412
9YPY|1|5|C|4413
9YPY|1|5|A|4414
9YPY|1|5|A|4415
9YPY|1|5|G|4416
*
9YPY|1|5|C|4426
9YPY|1|5|G|4427
9YPY|1|5|A|4428
9YPY|1|5|C|4429
9YPY|1|5|G|4430

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 12

Transfer RNA; tRNA

Chain I

60S ribosomal protein L10

Chain m

Ubiquitin A-52 residue ribosomal protein fusion product 1