IL_9YPY_223

3D structure

PDB id

9YPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome with accommodated A-site tRNA, Structure V

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGCC*GAAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPY|1|9|G|928
9YPY|1|9|G|929
9YPY|1|9|C|930
9YPY|1|9|C|931
*
9YPY|1|9|G|1010
9YPY|1|9|A|1011
9YPY|1|9|A|1012
9YPY|1|9|U|1013

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain BB

40S ribosomal protein S3a

Chain NN

Ribosomal protein S13

Chain bb

40S ribosomal protein S27