IL_9YQ1_218

3D structure

PDB id

9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 3, Structure Ic

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AC*GAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ1|1|9|A|802
9YQ1|1|9|C|803
*
9YQ1|1|9|G|860
9YQ1|1|9|A|861
9YQ1|1|9|A|862
9YQ1|1|9|U|863

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain HH

40S ribosomal protein S7

Chain LL

Ribosomal protein S11

Chain WW

Ribosomal protein S15a

Chain XX

uS12