IL_9ZF2_009

3D structure

PDB id

9ZF2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAG*CGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZF2_009 not in the Motif Atlas

Geometric match to IL_8CRE_476

Geometric discrepancy: 0.1159

The information below is about IL_8CRE_476

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9ZF2|1|A|C|284
9ZF2|1|A|G|285
9ZF2|1|A|A|286
9ZF2|1|A|A|287
9ZF2|1|A|G|288
*
9ZF2|1|A|C|297
9ZF2|1|A|G|298
9ZF2|1|A|G|299
9ZF2|1|A|A|300
9ZF2|1|A|G|301

Current chains

Chain A

RNase P RNA

Nearby chains