IL_9ZGO_009

3D structure

PDB id

9ZGO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAG*CGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZGO_009 not in the Motif Atlas

Geometric match to IL_8GLP_284

Geometric discrepancy: 0.1186

The information below is about IL_8GLP_284

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9ZGO|1|A|C|284
9ZGO|1|A|G|285
9ZGO|1|A|A|286
9ZGO|1|A|A|287
9ZGO|1|A|G|288
*
9ZGO|1|A|C|297
9ZGO|1|A|G|298
9ZGO|1|A|G|299
9ZGO|1|A|A|300
9ZGO|1|A|G|301

Current chains

Chain A

RNase P RNA

Nearby chains