IL_9ZGW_009

3D structure

PDB id

9ZGW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 13

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZGW_009 not in the Motif Atlas

Geometric match to IL_9H3G_004

Geometric discrepancy: 0.3155

The information below is about IL_9H3G_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87767.4

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

19

Unit IDs

9ZGW|1|A|C|347
9ZGW|1|A|G|348
9ZGW|1|A|G|349
9ZGW|1|A|A|350
9ZGW|1|A|G|351
*
9ZGW|1|A|C|378
9ZGW|1|A|G|379
9ZGW|1|A|A|380
9ZGW|1|A|A|381
9ZGW|1|A|G|382

Current chains

Chain A

RNase P RNA

Nearby chains