IL_9ZHB_007

3D structure

PDB id

9ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 25

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAGU*ACG

Length

7 nucleotides

Bulged bases

9ZHB|1|A|G|198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZHB_007 not in the Motif Atlas

Geometric match to IL_4PDQ_004

Geometric discrepancy: 0.3338

The information below is about IL_4PDQ_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9ZHB|1|A|C|196
9ZHB|1|A|A|197
9ZHB|1|A|G|198
9ZHB|1|A|U|199
*
9ZHB|1|A|A|232
9ZHB|1|A|C|233
9ZHB|1|A|G|234

Current chains

Chain A

RNase P RNA

Nearby chains