IL_9ZHD_005

3D structure

PDB id

9ZHD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 27

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAC*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZHD_005 not in the Motif Atlas

Geometric match to IL_5AOX_001

Geometric discrepancy: 0.1134

The information below is about IL_5AOX_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9ZHD|1|A|C|194
9ZHD|1|A|A|195
9ZHD|1|A|C|196
*
9ZHD|1|A|G|234
9ZHD|1|A|C|235
9ZHD|1|A|G|236

Current chains

Chain A

RNase P RNA

Nearby chains