IL_9ZHI_008

3D structure

PDB id

9ZHI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 31

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZHI_008 not in the Motif Atlas

Geometric match to IL_9DFE_075

Geometric discrepancy: 0.2149

The information below is about IL_9DFE_075

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9ZHI|1|A|C|347
9ZHI|1|A|G|348
9ZHI|1|A|G|349
9ZHI|1|A|A|350
9ZHI|1|A|G|351
*
9ZHI|1|A|C|378
9ZHI|1|A|G|379
9ZHI|1|A|A|380
9ZHI|1|A|A|381
9ZHI|1|A|G|382

Current chains

Chain A

RNase P RNA

Nearby chains