IL_9ZHK_006

3D structure

PDB id

9ZHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 33

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

AC*GUU

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZHK_006 not in the Motif Atlas

Geometric match to IL_8P9A_233

Geometric discrepancy: 0.3558

The information below is about IL_8P9A_233

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

9ZHK|1|A|A|151
9ZHK|1|A|C|152
*
9ZHK|1|A|G|173
9ZHK|1|A|U|174
9ZHK|1|A|U|175

Current chains

Chain A

RNase P RNA

Nearby chains