IL_9ZI7_009

3D structure

PDB id

9ZI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 54

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZI7_009 not in the Motif Atlas

Geometric match to IL_9H3G_243

Geometric discrepancy: 0.2226

The information below is about IL_9H3G_243

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15190.4

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

9ZI7|1|A|C|347
9ZI7|1|A|G|348
9ZI7|1|A|G|349
9ZI7|1|A|A|350
9ZI7|1|A|G|351
*
9ZI7|1|A|C|378
9ZI7|1|A|G|379
9ZI7|1|A|A|380
9ZI7|1|A|A|381
9ZI7|1|A|G|382

Current chains

Chain A

RNase P RNA

Nearby chains