IL_9ZIF_004

3D structure

PDB id

9ZIF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 7

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CU*GGG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZIF_004 not in the Motif Atlas

Geometric match to IL_8OI5_088

Geometric discrepancy: 0.1801

The information below is about IL_8OI5_088

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15011.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

54

Unit IDs

9ZIF|1|A|C|119
9ZIF|1|A|U|120
*
9ZIF|1|A|G|131
9ZIF|1|A|G|132
9ZIF|1|A|G|133

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains