IL_9ZIL_006

3D structure

PDB id

9ZIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 13

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CACAGUGACGGAGCUC*GAGGUGGAACGCG

Length

29 nucleotides

Bulged bases

9ZIL|1|A|G|204, 9ZIL|1|A|U|208, 9ZIL|1|A|C|235

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIL|1|A|C|194
9ZIL|1|A|A|195
9ZIL|1|A|C|196
9ZIL|1|A|A|197
9ZIL|1|A|G|198
9ZIL|1|A|U|199
9ZIL|1|A|G|200
9ZIL|1|A|A|201
9ZIL|1|A|C|202
9ZIL|1|A|G|203
9ZIL|1|A|G|204
9ZIL|1|A|A|205
9ZIL|1|A|G|206
9ZIL|1|A|C|207
9ZIL|1|A|U|208
9ZIL|1|A|C|209
*
9ZIL|1|A|G|224
9ZIL|1|A|A|225
9ZIL|1|A|G|226
9ZIL|1|A|G|227
9ZIL|1|A|U|228
9ZIL|1|A|G|229
9ZIL|1|A|G|230
9ZIL|1|A|A|231
9ZIL|1|A|A|232
9ZIL|1|A|C|233
9ZIL|1|A|G|234
9ZIL|1|A|C|235
9ZIL|1|A|G|236

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains