IL_9ZIU_007

3D structure

PDB id

9ZIU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 16

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

ACGU*AUAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZIU_007 not in the Motif Atlas

Geometric match to IL_4K27_001

Geometric discrepancy: 0.2615

The information below is about IL_4K27_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

38

Unit IDs

9ZIU|1|A|A|155
9ZIU|1|A|C|156
9ZIU|1|A|G|157
9ZIU|1|A|U|158
*
9ZIU|1|A|A|168
9ZIU|1|A|U|169
9ZIU|1|A|A|170
9ZIU|1|A|U|171

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains